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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*31:01-B*48:01-C*08:03-DRB1*04:04-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 2 | B*48:01-C*08:01-DRB1*04:04-DQB1*03:02 | Mexico Mexico City Mestizo population | 1.05 | 143 | 19_25_N_99_7_W |
| 3 | A*68:03-B*48:01-C*08:03-DRB1*04:04-DQA1*03:01-DQB1*03:02 | Mexico Tixcacaltuyub Maya | 0.75 | 67 | 20_29_N_88_54_W |
| 4 | A*24:02:01-B*48:01:01-C*08:01:01-DRB1*04:04:01-DQB1*03:02:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 5 | A*66:01:01-B*48:01:01-C*08:01:01-DRB1*04:04:01-DQB1*03:02:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 6 | B*48:01-C*08:01-DRB1*04:04-DQB1*03:02 | Mexico Mexico City Mestizo pop 2 | 0.64 | 234 | 19_26_N_99_8_W |
| 7 | A*68:01-B*48:01-C*08:01-DRB1*04:04-DRB4*01:01-DQB1*03:02 | USA NMDP Mexican or Chicano | 0.58 | 261,235 | 38_45_N_76_6_W |
| 8 | A*26:01-B*48:01-DRB1*04:04-DQB1*03:02 | Mexico Chihuahua Chihuahua City Pop 2 | 0.57 | 88 | 28_48_N_106_26_W |
| 9 | A*02:01-B*48:01-C*08:01-DRB1*04:04-DQB1*03:02 | Mexico Mexico City Mestizo population | 0.35 | 143 | 19_25_N_99_7_W |
| 10 | A*23:01-B*48:01-C*08:01-DRB1*04:04-DQB1*03:02 | Mexico Mexico City Mestizo population | 0.35 | 143 | 19_25_N_99_7_W |
| 11 | A*24:02-B*48:01-C*08:01-DRB1*04:04-DQB1*03:02 | Mexico Mexico City Mestizo population | 0.35 | 143 | 19_25_N_99_7_W |
| 12 | A*24:02-B*48:01-DRB1*04:04-DQB1*03:02 | Peru Titikaka Lake Uros | 0.29 | 105 | 15_50_S_70_1_W |
| 13 | A*24:02-B*48:01-C*08:01-DRB1*04:04-DQB1*03:02 | USA Hispanic pop 2 | 0.28 | 1,999 | 44_58_N_93_15_W |
| 14 | A*02:06-B*48:01-C*08:01-DRB1*04:04-DQA1*03:01-DQB1*03:02-DPB1*04:02 | USA San Diego | 0.26 | 496 | 32_50_N_117_15_W |
| 15 | A*68:01-B*48:01-C*08:01-DRB1*04:04-DQB1*03:02 | USA Hispanic pop 2 | 0.23 | 1,999 | 44_58_N_93_15_W |
| 16 | A*02:06-B*48:01-C*07:02-DRB1*04:04-DQA1*03:01-DQB1*03:02-DPB1*14:01 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 17 | A*24:25-B*48:01-C*08:01-DRB1*04:04-DQA1*03:01-DQB1*03:02-DPB1*04:02 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 18 | A*68:01-B*48:01-C*08:01-DRB1*04:04-DRB4*01:01-DQB1*03:02 | USA NMDP Hispanic South or Central American | 0.20 | 146,714 | 38_45_N_76_6_W |
| 19 | A*02:06-B*48:01-C*08:01-DRB1*04:04-DQB1*03:02 | USA Hispanic pop 2 | 0.19 | 1,999 | 44_58_N_93_15_W |
| 20 | A*02:01-B*48:01-DRB1*04:04-DQB1*03:02 | Peru Titikaka Lake Uros | 0.16 | 105 | 15_50_S_70_1_W |
| 21 | A*24:02-B*48:01-C*08:01-DRB1*04:04-DQB1*03:02 | Colombia Bogotá Cord Blood | 0.16 | 1,463 | 4_39_N_73_52_W |
| 22 | A*02:01-B*48:01-DRB1*04:04-DQB1*03:02 | Mexico Mexico City Tlalpan | 0.15 | 330 | 19_25_N_99_8_W |
| 23 | A*24:02-B*48:01-DRB1*04:04-DQB1*03:02 | Mexico Mexico City Tlalpan | 0.15 | 330 | 19_25_N_99_8_W |
| 24 | A*24:25-B*48:01-C*08:01-DRB1*04:04-DQB1*03:02 | USA Hispanic pop 2 | 0.09 | 1,999 | 44_58_N_93_15_W |
| 25 | A*02:01-B*48:01-C*08:01-DRB1*04:04-DQB1*03:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 26 | A*23:01-B*48:01-C*01:02-DRB1*04:04-DQB1*03:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 27 | A*24:02-B*48:01-C*08:162-DRB1*04:04-DQB1*03:02 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 28 | A*68:01-B*48:01-C*08:01-DRB1*04:04-DRB4*01:01-DQB1*03:02 | USA NMDP North American Amerindian | 0.02 | 35,791 | 38_45_N_76_6_W |
| 29 | A*68:01-B*48:01-C*08:01-DRB1*04:04-DRB4*01:01-DQB1*03:02 | USA NMDP Caribean Hispanic | 0.01 | 115,374 | 38_45_N_76_6_W |
| 30 | A*68:01-B*48:01-C*08:01-DRB1*04:04-DRB4*01:01-DQB1*03:02 | USA NMDP Middle Eastern or North Coast of Africa | 0.00 | 70,890 | 38_45_N_76_6_W |
| 31 | A*68:01-B*48:01-C*08:01-DRB1*04:04-DRB4*01:01-DQB1*03:02 | USA NMDP European Caucasian | 0.00 | 1,242,890 | 38_45_N_76_6_W |
| 32 | A*68:01-B*48:01-C*08:01-DRB1*04:04-DRB4*01:01-DQB1*03:02 | USA NMDP Filipino | 0.00 | 50,614 | 38_45_N_76_6_W |
| 33 | A*68:01-B*48:01-C*08:01-DRB1*04:04-DRB4*01:01-DQB1*03:02 | USA NMDP African American pop 2 | 0.00 | 416,581 | 38_45_N_76_6_W |
| 34 | A*68:01-B*48:01-C*08:01-DRB1*04:04-DRB4*01:01-DQB1*03:02 | USA NMDP Japanese | 0.00 | 24,582 | 38_45_N_76_6_W |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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